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Data

schemas.workflow.westpa.cfg.data.DataConfig

Bases: BaseModel

aux_compression_threshold = Field(default=1048576) class-attribute instance-attribute

The threshold in bytes for compressing the auxiliary data in a dataset on an iteration-by-iteration basis.

data_refs = Field(default_factory=DataRefs) class-attribute instance-attribute

References to various data paths.

datasets = Field(default=None) class-attribute instance-attribute

List of all datasets to load.

iter_prec = Field(default=8) class-attribute instance-attribute

The length of the iteration index with zero-padding. For the default value, iteration 1 would be specified as iter_00000001.

load_auxdata = Field(default=False) class-attribute instance-attribute

Load all datasets without an explicit load specification.

west_data_file = Field(default='west.h5') class-attribute instance-attribute

The name of the main HDF5 data storage file for the WESTPA simulation.

schemas.workflow.westpa.cfg.data.DataRefs

Bases: BaseModel

basis_state = Field(default='$WEST_SIM_ROOT/bstates/{basis_state.auxref}') class-attribute instance-attribute

initial_state = Field(default='$WEST_SIM_ROOT/istates/{initial_state.iter_created}/{initial_state.state_id}.xml') class-attribute instance-attribute

segment = Field(default='$WEST_SIM_ROOT/traj_segs/{segment.n_iter:06d}/{segment.seg_id:06d}') class-attribute instance-attribute

schemas.workflow.westpa.cfg.data.DatasetsConfig

Bases: BaseModel

chunks = Field(default=None) class-attribute instance-attribute

compression = Field(default=None) class-attribute instance-attribute

dtype = Field(default=None) class-attribute instance-attribute

h5path = Field(default=None) class-attribute instance-attribute

load = Field(default=False) class-attribute instance-attribute

name instance-attribute

scaleoffset = Field(default=None) class-attribute instance-attribute

store = Field(default=True) class-attribute instance-attribute